Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900283.1_cds_XP_016450357.1_44819
CDS Infomation

[gene=LOC107775173] [db_xref=GeneID:107775173] [protein=mechanosensitive ion channel protein 10-like] [protein_id=XP_016450357.1] [location=complement(join(140241..140502,141955..142157,142237..142530,143176..143296,143437..144542))] [gbkey=CDS]
Sequence

ATGTTTGATGAACAAGCTGCTGAGCCAAGTGCAGGTTCCCCCAATAGGAATGTATCTAAC
CATGCTTCCCCTACTGCTAAAATGGGTTCCAGTAATACATTTGAAGAGATTACGAGAGCA
GTATCTATATCAGTAACCCCAAGAACACCATTAATGGCATCACCAGGTGGTTTTGGAGGA
GTGGATGAAGATGAGGAGATATATAAGAAAGTGAGCTTAAGGAATAAGTTGAAGTATAAA
AGAGTTAAAGCAAAAGTTCTGATTGAATGGCTGCTGTTTCTTTGCCTTTTAGGTTGTTTA
CTGGCTAGTTTATTGGTAAAAAAGTTCCATAATTGGAAGCTTTGGGATTTGAGGATCTGG
AAATGGATTGTCCTTGTTATGGTGACCTTTAGTGGCATGCTGGTTACTAAGTGGTTTATA
CATTTTGTTATCTTGTTGATAGAATTGAACTTTTTGTTGAGGAAGAAGGTGTTGTATTTT
GTCTTTGGTTTAAAGAAAAGTGTTCAAGTTTGCATTTGGTTTTGCTTGGTTCTTCTCACA
TGGGTTCTGCTCTTCTCACACGAGGAACGGTCACGTACTGCCGAGAAGGTTACTGATTTT
ATTACCTGGACTATTACAGCTATGCTTATTGGTGCATTCTTGTGGCTCTTGAAGACTTTG
CTGGTAAAGATTTTGGCTGCCTCCTTCCACGTAAACGCATTCTTTGACCGGATTCAAGAG
TCAATCTTTCATCAGTATATTCTACTGAGTCTATCAGGACTCCCAGTTATGGAGTCTGCT
CAGATATTGGGGAGATCAAACAGTGCCACCAGTCAATTTAGTTTCCGCAGAACAAAGAAG
GGAAAAGATGGGGAGGAAAAGAAAGAAAAGGCAGTGATTGATATTAATAAACTTCATCAG
ATGAAGCGAGAAAAAGTCTCTGCATGGACCATGAAAATGTTAATTGATGTAATATCTAAC
TCAGGACTTTCCACTATCTCTGGCTCGATCGGTGAGAATGACTATGATGCAGCATGTGAG
CAAGCAGATAATGAGATCACCAATGAATGGGAAGCAATTGCTGCTGCCTATCACATCTTC
AGGAATGTCGCACCGCCTGGTTCCAAGTGCATTGATGAGTATGATCTTAGGAGATTCTTG
ATAAAAGAAGAGGTTGATATTGTGTTCCCCATGATAGATGTGGCAGAAACTGGACAGATT
GATAGGAAATCATTCACGGAATGGGTGGTTAAAGTTTATCAAGGACGCAGAGTTCTAGCA
GATTCTTTGATAGATACAAAAACTGCTGTGAAGCAATTGAACAAGGCCGTGACATGCATT
CTGGTTGTTGTAATAATCATCATATGGCTCCTTTTGGTGGGAATAGCGACTACTAAAGTG
ATTGTCTTTCTGTCGTCACAACTCGTGGTAGCTGCTTTTATTTTTGGGAATACTTGCAAG
ACTATATTTGAAGCTATTATATTCGTATTTGTGATGCATCCTTTTGATGTTGGTGATCGA
TGTGTCATTGATGGTGTTCAGATGATTGTTGAAGAAATGAATATCCTGACCACAGTATTT
TTGAGGTTTGATAACGAAAAGATATTCTACCCAAATTCAGTTTTAGCCGTCAAGCCAATC
AGCAATTTCTATAGAAGTCCTAATATGGGTGATGCCTTTGAGTTTTCCGTTGATTACAGG
ACACCTGTGGAAAAGATAGGAGTTCTAAAAGAGAAAACAAAGAAGTACTTAGAGAAAACT
CCCCAGTATTGGCATCCTAATCACAGCGTGGCGGTGAAGGAGATTGAAAATATGAACAAA
ATCAAAATGGCACTGTATTTCAATCATACTATGAACTTTCAAAATTTTGGTGAAAAGAAC
AAACGAAGAACTGAGATAATCCTCGAAATGAAGAAAATGTTTGACGAGCTAAATATAAAA
TATGATCTTCTTCCCCGGGAAGTTCATCTTCTCGATCAAAGAGCAACAAGTGGGAACAGT
AGATGA

Peptide Sequence

PEP ID

XP_016450357.1
PEP Infomation

PREDICTED: mechanosensitive ion channel protein 10-like [Nicotiana tabacum]
Sequence

MFDEQAAEPSAGSPNRNVSNHASPTAKMGSSNTFEEITRAVSISVTPRTPLMASPGGFGG
VDEDEEIYKKVSLRNKLKYKRVKAKVLIEWLLFLCLLGCLLASLLVKKFHNWKLWDLRIW
KWIVLVMVTFSGMLVTKWFIHFVILLIELNFLLRKKVLYFVFGLKKSVQVCIWFCLVLLT
WVLLFSHEERSRTAEKVTDFITWTITAMLIGAFLWLLKTLLVKILAASFHVNAFFDRIQE
SIFHQYILLSLSGLPVMESAQILGRSNSATSQFSFRRTKKGKDGEEKKEKAVIDINKLHQ
MKREKVSAWTMKMLIDVISNSGLSTISGSIGENDYDAACEQADNEITNEWEAIAAAYHIF
RNVAPPGSKCIDEYDLRRFLIKEEVDIVFPMIDVAETGQIDRKSFTEWVVKVYQGRRVLA
DSLIDTKTAVKQLNKAVTCILVVVIIIIWLLLVGIATTKVIVFLSSQLVVAAFIFGNTCK
TIFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRFDNEKIFYPNSVLAVKPI
SNFYRSPNMGDAFEFSVDYRTPVEKIGVLKEKTKKYLEKTPQYWHPNHSVAVKEIENMNK
IKMALYFNHTMNFQNFGEKNKRRTEIILEMKKMFDELNIKYDLLPREVHLLDQRATSGNS
R

Transcript Sequence

Gene sequence data has not been registered.